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ScanConfig

Struct ScanConfig 

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pub struct ScanConfig {
    pub params: CurveParams,
    pub sym: SymParams,
    pub stage: Stage,
    pub chunk_scores: usize,
    pub batch: usize,
    pub window_bases: usize,
}
Expand description

Everything a scoring run needs beyond the input file itself.

Grouped rather than passed one at a time: these travel together through every entry point here, and a function taking eight positional values is easy to call wrongly.

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§params: CurveParams§sym: SymParams§stage: Stage§chunk_scores: usize

Scores produced per chunk, which is how the memory budget is applied.

§batch: usize

Chunks scored at once, normally the worker count.

§window_bases: usize

Bases held at once when reading through an index.

Implementations§

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impl ScanConfig

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pub fn lead_in(&self) -> usize

How many bases at each end of a piece receive no score, for the selected stage.

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pub fn stride(&self) -> usize

The gap between consecutive output positions.

Trait Implementations§

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impl Clone for ScanConfig

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fn clone(&self) -> ScanConfig

Returns a duplicate of the value. Read more
1.0.0 (const: unstable) · Source§

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more
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impl Copy for ScanConfig

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impl Debug for ScanConfig

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more

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impl<T> Any for T
where T: 'static + ?Sized,

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where T: ?Sized,

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fn borrow(&self) -> &T

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impl<T> BorrowMut<T> for T
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fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more
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impl<T> CloneToUninit for T
where T: Clone,

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unsafe fn clone_to_uninit(&self, dest: *mut u8)

🔬This is a nightly-only experimental API. (clone_to_uninit)
Performs copy-assignment from self to dest. Read more
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impl<T> From<T> for T

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fn from(t: T) -> T

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impl<T, U> Into<U> for T
where U: From<T>,

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Calls U::from(self).

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Converts self into a Left variant of Either<Self, Self> if into_left is true. Converts self into a Right variant of Either<Self, Self> otherwise. Read more
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fn into_either_with<F>(self, into_left: F) -> Either<Self, Self>
where F: FnOnce(&Self) -> bool,

Converts self into a Left variant of Either<Self, Self> if into_left(&self) returns true. Converts self into a Right variant of Either<Self, Self> otherwise. Read more
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impl<T> Pointable for T

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const ALIGN: usize

The alignment of pointer.
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type Init = T

The type for initializers.
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unsafe fn init(init: <T as Pointable>::Init) -> usize

Initializes a with the given initializer. Read more
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Dereferences the given pointer. Read more
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type Owned = T

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type Error = <U as TryFrom<T>>::Error

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fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

Performs the conversion.